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Patrick Gaffney

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Professor

Oklahoma Medical Research Foundation

United States

Research Interests

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Recent Grants

Grant: Open

Center for Genomic Regulation

Open Date: 2025-06-10

Close Date: 2030-04-30

Grant: Close

Mechanistic Studies of Genetic Risk Scleroderma

Open Date: 2025-04-01

Close Date: 2026-03-01

Grant: Close

Development of HCR FlowFISH CRISPRi screening technology for SLE risk genes

Open Date: 2024-12-01

Close Date: 2025-11-01

Grant: Open

Defining the Regulatory Landscape of Lupus with CVD Comorbidity

Open Date: 2024-11-20

Close Date: 2029-10-31

Grant: Open

Epigenetic Mechanisms That Drive Genetic Risk in Juvenile Arthritis

Open Date: 2022-09-26

Close Date: 2027-08-31

Articles (12)

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2026

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2025

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2023

Collaborators (17)

Roser Urreizti

Collaborator

University of Barcelona

SPAIN

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Javier Martin

Professor

Instituto de Parasitología y Biomedicina López-Neyra

SPAIN

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David van Heel

Professor

Queen Mary University of London

UNITED KINGDOM

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Marta Eugenia Alarcón Riquelme

Scientific Director

Centro Pfizer - Universidad de Granada - Junta de Andalucía de Genómica e Investigación Oncológica

SPAIN

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DeLisa Fairweather

Mayo Clinic Florida

UNITED STATES

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Gudny Ella Thorlacius

Karolinska Institutet

SWEDEN

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Ingrid Kockum

Research group leader at Karolinska Institutet

Karolinska Institutet

SWEDEN

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Janna Saarela

University of Helsinki

FINLAND

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Timothy J Vyse

Professor

King’s College London

UNITED KINGDOM

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Iris Jonkers

Associate professor

Universitair Medisch Centrum Groningen (UMCG)

NETHERLANDS

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Christopher J Lessard

Professor

Oklahoma Medical Research Foundation

UNITED STATES

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Matthew R. Lincoln

Assistant Professor

University of Toronto

CANADA

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Cisca Wijmenga

Lodewijk Sandkuijl distinguished university professor of human genetics

University Medical Center Groningen

NETHERLANDS

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Christopher Sjöwall

Senior Associate Professor

Linköping University

SWEDEN

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David Morris

King’s College London

UNITED KINGDOM

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Francesc Palau

SJD Distinguished Investigator & Chair, Scientific Advisory Board

University of Barcelona

SPAIN

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Mandi Wiley

Associate Staff Scientist

Oklahoma Medical Research Foundation

UNITED STATES

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Patrick Gaffney

Research Interests

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Recent Grants

Articles (12)

Functional and computational interrogation of juvenile idiopathic arthritis risk loci in CD4+ T cells.

Variants in the DDX6-CXCR5 autoimmune disease risk locus influence the regulatory network in immune cells and salivary gland.

Cardiac autoantibodies promote a fibrotic transcriptome and reduced ventricular recovery in human myocarditis

Clinical and molecular characterization of SLC31A1-related developmental and epileptic encephalopathy: insights from 13 new cases.

Defining three dimensional chromatin structures of pediatric and adolescent B cells using primary B cell and EBV-immortalized B cell reference genomes.

Genetic mapping across autoimmune diseases reveals shared associations and mechanisms

Analysis of nuclear receptor expression in head and neck cancer.

Massively parallel reporter assay confirms regulatory potential of hQTLs and reveals important variants in lupus and other autoimmune diseases.

Potential Roles of Activin in Head and Neck Squamous Cell Carcinoma Progression and Mortality.

Taming the HLA for single-cell genomics.

Variants in the DDX6-CXCR5 autoimmune dissease risk locus influence the regulatory network in immune cells and salivary gland

Comparison of the three-dimensional chromatin structures of adolescent and adult peripheral blood B cells: implications for the study of pediatric autoimmune diseases.

Collaborators (17)

Roser Urreizti

Javier Martin

David van Heel

Marta Eugenia Alarcón Riquelme

DeLisa Fairweather

Gudny Ella Thorlacius

Ingrid Kockum

Janna Saarela

Timothy J Vyse

Iris Jonkers

Christopher J Lessard

Matthew R. Lincoln

Cisca Wijmenga

Christopher Sjöwall

David Morris

Francesc Palau

Mandi Wiley

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