Sarah Teichmann

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University of Cambridge

United Kingdom

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Mapping Cells and Interactions in the Thymus Across Development and Aging

Open Date: 2019-01-01

Close Date: 2023-01-01

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Collaborators (20)

Tuomas Knowles

Professor of Physical Chemistry and Biophysics

University of Cambridge

UNITED KINGDOM

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Neil Henderson

The University of Edinburgh MRC Human Genetics Unit

UNITED KINGDOM

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Colin Logie

NETHERLANDS

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Jonathan Silverstein

Professor

University of Pittsburgh

UNITED STATES

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Ramon Viñas

EPFL

SWITZERLAND

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Fabian Theis

Director of the Institute of Computational Biology and Professor

Technical University of Munich

GERMANY

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Jasmin Fisher

Professor of Computational Biology

University College London

UNITED KINGDOM

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Norbert Hübner

Professor

GERMANY

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Matteo Pellegrini

University of California

UNITED STATES

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Richard Harvey

Deputy Director Victor Chang Institute, Head of Cardiac Developmental and Stem Cell Biology Division; Professor of Heart Research, University of New South Wales, Australia

Victor Chang Cardiac Research Institute

AUSTRALIA

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Nicole Marquardt

Karolinska Institutet

SWEDEN

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Michela Noseda

Imperial College London

UNITED KINGDOM

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Berend Snijder

Assistant Professor

ETH Zürich

SWITZERLAND

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Gavin Wright

Professor of Microbial Biochemistry

University of York

UNITED KINGDOM

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Fiona Powrie

University of Oxford

UNITED KINGDOM

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Michael Morgan

University of Aberdeen

UNITED KINGDOM

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Muzlifah Haniffa

Wellcome Sanger Institute

UNITED KINGDOM

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Ebba Sohlberg

Karolinska Institutet

SWEDEN

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Chuan Xu

University of Cambridge

UNITED KINGDOM

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Gloria Pryhuber

Professor

University of Rochester Medical Center

UNITED STATES

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Sarah Teichmann

Research Interests

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Recent Grants

Articles (28)

Systema: a framework for evaluating genetic perturbation response prediction beyond systematic variation

Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage

CellPhoneDB v5: inferring cell–cell communication from single-cell multiomics data

Temporal profiling of human lymphoid tissues reveals coordinated defense against viral challenge

The Human Cell Atlas from a cell census to a unified foundation model

Pan-cancer profiling of tumor-infiltrating natural killer cells through transcriptional reference mapping

Protein Condensate Atlas from predictive models of heteromolecular condensate composition

Spatial genomics: mapping human steatotic liver disease

Challenges and perspectives in computational deconvolution of genomics data

Multi-modal generative modeling for joint analysis of single-cell T cell receptor and gene expression data

Molecular connectomics: Placing cells into morphological tissue context

Revisiting Cardiac Biology in the Era of Single Cell and Spatial Omics

Immune microniches shape intestinal Treg function

multiDGD: A versatile deep generative model for multi-omics data

Author Correction: A physical wiring diagram for the human immune system

Bin2cell reconstructs cells from high resolution Visium HD data

Single-cell transcriptomics for the assessment of cardiac disease

Quantification of absolute transcription factor binding affinities in the native chromatin context using BANC-seq

scMoMaT jointly performs single cell mosaic integration and multi-modal bio-marker detection

Characterizing Different Modes of Interplay Between Rap1 and H3 Using Inducible H3-depletion Yeast

How developmental cell atlases inform stem cell embryo models

Differential abundance testing on single-cell data using k-nearest neighbor graphs

A physical wiring diagram for the human immune system.

Impact of the Human Cell Atlas on medicine

Identification of visual cortex cell types and species differences using single-cell RNA sequencing

Community voices: policy proposals to promote inclusion in academia through the lens of women in science

Single-cell atlases: shared and tissue-specific cell types across human organs

Completing the cancer jigsaw puzzle with single-cell multiomics

Collaborators (20)

Tuomas Knowles

Neil Henderson

Colin Logie

Jonathan Silverstein

Ramon Viñas

Fabian Theis

Jasmin Fisher

Norbert Hübner

Matteo Pellegrini

Richard Harvey

Nicole Marquardt

Michela Noseda

Berend Snijder

Gavin Wright

Fiona Powrie

Michael Morgan

Muzlifah Haniffa

Ebba Sohlberg

Chuan Xu

Gloria Pryhuber

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