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Tim-Christoph Roloff

Group Leader

SIB Swiss Institute of Bioinformatics

Switzerland

Research Interests

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Professors in Switzerland Professors in Microbiology Microbiology professors in Switzerland

Articles (20)

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2026

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2025

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2023

Collaborators (34)

Matthew Holden

University of St. Andrews

UNITED KINGDOM

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Helena Seth-Smith

Co-Leader of Microbial Genomics Devision

University of Zurich

SWITZERLAND

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Caroline Pot

Associate Professor

Lausanne University Hospital

SWITZERLAND

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Martin Siegemund

Clinical Head

University of Basel

SWITZERLAND

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Richard Neher

Professor

University of Basel

SWITZERLAND

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Sabina Leanti La Rosa

Associate Professor in Microbiology

Norwegian University of Life Sciences

NORWAY

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Tinh‐Hai Collet

SWITZERLAND

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Laura Hug

Assistant Professor

University of Waterloo

CANADA

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Mario Ramirez

Full Professor

Universidade do Porto Faculdade de Medicina

PORTUGAL

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Stefano Mancini

University of Zurich

SWITZERLAND

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Sam Lipworth

University of Oxford

UNITED KINGDOM

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Luciana Santoferrara

Associate Professor

Hofstra University

UNITED STATES

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Sven N. Hobbie

University of Zurich

SWITZERLAND

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Jason Rothman

University of California, Riverside

UNITED STATES

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Adrian Egli

Professor

University of Zurich

SWITZERLAND

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Ana Paula Finatto Canabarro

Karolinska Institutet

SWEDEN

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Stefano Bassetti

Head

University Hospital Basel

SWITZERLAND

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Daniel Tamarit

Assistant professor

Utrecht University

NETHERLANDS

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Alexis Marshall

Lecturer Molecular Biology and Genetics

RMIT University

AUSTRALIA

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Ulrich Heininger

Head

University Children’s Hospital Basel

SWITZERLAND

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Ella Sieradzki

VIP, Tenure Track Assistant Professor

Aarhus University

DENMARK

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Lorenz Risch

Titularprofessur für das Fach klinische Biochemie

University of Bern

SWITZERLAND

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Katherine M. Pappas

Associate Professor of Genetics - Molecular Microbial Genetics

National and Kapodistrian University of Athens

GREECE

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Lena Feige

GERMANY

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Alexandra Trkola

University of Zurich

SWITZERLAND

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Frederik Bak

Associate Professor

Københavns Universitet

DENMARK

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Gottfried Heinrich Dasen

Lecturer

Zurich University of Applied Sciences (ZHAW)

SWITZERLAND

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Carl-Eric Wegner

Tenured Research Group Leader

Heinrich Heine University Düsseldorf

GERMANY

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Christiane Hassenrück

Leibniz Institute for Baltic Sea Research

GERMANY

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Oliver Nolte

Head Diagnostics

University of Zurich

SWITZERLAND

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Daan Rogier Speth

Universität Wien

AUSTRIA

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Philipp Kohler

Senior Researcher

University of Zurich

SWITZERLAND

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Tom Williams

University of Bristol

UNITED KINGDOM

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Julia Vierheilig

Research Group Leader (Tenure Track)

TU Wien

AUSTRIA

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Tim-Christoph Roloff

Research Interests

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Articles (20)

Benchmarking Illumina and Oxford Nanopore Technologies (ONT) sequencing platforms for whole genome sequencing of bacterial genomes and use in clinical microbiology

Conference report: The second Bacterial Genome Sequencing Pan-European Network conference

Performance of disc diffusion and gradient strip test on different Mueller–Hinton agar media plates and ComASP® and Bruker UMIC® Cefiderocol Microdilution Panels for cefiderocol susceptibility testing in carbapenem-resistant Pseudomonas aeruginosa

Diagnostic algorithm for the detection of carbapenemases and extended-spectrum β-lactamases in carbapenem-resistant Pseudomonas aeruginosa

Usage of Bacterial Whole Genome Sequencing: Outbreaks and Beyond in Pediatric Patients

A roadmap for equitable reuse of public microbiome data

<i>Corynebacterium diphtheriae</i> Outbreak in Migrant Populations in Europe

Gut-derived metabolites drive Th17 cell pathogenicity in multiple sclerosis.

Historic methicillin-resistant Staphylococcus aureus: expanding current knowledge using molecular epidemiological characterization of a Swiss legacy collection

Towards unified reporting of genome sequencing results in clinical microbiology

Conference report: the first bacterial genome sequencing pan-European network conference

Novel Organism Verification and Analysis (NOVA) study: identification of 35 clinical isolates representing potentially novel bacterial taxa using a pipeline based on whole genome sequencing

S-Gene Target Failure as an Effective Tool for Tracking the Emergence of Dominant SARS-CoV-2 Variants in Switzerland and Liechtenstein, Including Alpha, Delta, and Omicron BA.1, BA.2, and BA.4/BA.5

How much should we sequence? An analysis of the Swiss SARS-CoV-2 surveillance effort.

Evaluation of DNA extraction kits for long-read shotgun metagenomics using Oxford Nanopore sequencing for rapid taxonomic and antimicrobial resistance detection

Colonization with resistant bacteria in hospital employees: an epidemiological surveillance and typing study

Evaluation of the RESIST ACINETO multiplex immunochromatographic assay for detection of OXA-23-like, OXA-40/58-like and NDM carbapenemase production in <i>Acinetobacter baumannii</i>

Comparison of Disk Diffusion, E-Test, and Broth Microdilution Methods for Testing In Vitro Activity of Cefiderocol in Acinetobacter baumannii

Bacterial genome-wide association study substantiates papGII of Escherichia coli as a major risk factor for urosepsis.

The Swiss Pathogen Surveillance Platform - towards a nation-wide One Health data exchange platform for bacterial, viral and fungal genomics and associated metadata.

Collaborators (34)

Matthew Holden

Helena Seth-Smith

Caroline Pot

Martin Siegemund

Richard Neher

Sabina Leanti La Rosa

Tinh‐Hai Collet

Laura Hug

Mario Ramirez

Stefano Mancini

Sam Lipworth

Luciana Santoferrara

Sven N. Hobbie

Jason Rothman

Adrian Egli

Ana Paula Finatto Canabarro

Stefano Bassetti

Daniel Tamarit

Alexis Marshall

Ulrich Heininger

Ella Sieradzki

Lorenz Risch

Katherine M. Pappas

Lena Feige

Alexandra Trkola

Frederik Bak

Gottfried Heinrich Dasen

Carl-Eric Wegner

Christiane Hassenrück

Oliver Nolte

Daan Rogier Speth

Philipp Kohler

Tom Williams

Julia Vierheilig

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