Yuji Inagaki

Professor

University of Tsukuba

Japan

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Professor Yuji Inagaki is a faculty member at the University of Tsukuba in Japan. His research focuses on various aspects of protist biology and evolutionary relationships, as evidenced by his recent publications on Heterolobosea, eukaryotic phylogenetics, and the evolution of mitochondrial genomes. He is particularly interested in the evolutionary implications of symbiotic relationships and the genetic underpinnings of distinct life stages in protists.

Articles (22)

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2025

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2021

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2021

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2021

Collaborators (3)

Hirokazu SAKAMOTO

Assistant Professor

Chiba University

JAPAN

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Alexander Tice

Assistant Professor

Texas Tech University

UNITED STATES

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Mattia Tiboni

University of Urbino

ITALY

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Yuji Inagaki

Research Interests

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About

Articles (22)

A Deeply Branching Lineage in Heterolobosea (Discoba) With Multiflagellated and Multigrooved Life Stages

Protists with Uncertain Phylogenetic Affiliations for Resolving the Deep Tree of Eukaryotes

Glissandra oviformis n. sp.: a novel predatory flagellate illuminates the character evolution within the eukaryotic clade CRuMs

Complete Mitochondrial Genomes of Ancyromonads Provide Clues for the Gene Content and Genome Structures of Ancestral Mitochondria

An expanded phylogenomic analysis of Heterolobosea reveals the deep relationships, non-canonical genetic codes, and cryptic flagellate stages in the group

Marked Genome Reduction Driven by a Parasitic Lifestyle: Two Complete Genomes of Endosymbiotic Bacteria Possibly Hosted by a Dinoflagellate

Dinotoms possess two evolutionary distinct autophagy-related ubiquitin-like conjugation systems

Convergent reductive evolution of cyanobacteria in symbiosis with Dinophysiales dinoflagellates

Encyclopaedia of family A DNA polymerases localized in organelles: Evolutionary contribution of bacteria including the proto-mitochondrion.

AUTOEB: A Software for Systematically Evaluating Bipartitions in a Phylogenetic Tree Employing an Approximately Unbiased Test

AtLASS: A Scheme for End-to-End Prediction of Splice Sites Using Attention-based Bi-LSTM

Fascinating strategies of marine benthic organisms to cope with emerging pollutant: Titanium dioxide nanoparticles

Draft Genome Sequence of Aduncisulcus paluster, a Free-Living Microaerophilic Eukaryote Belonging to the Fornicata

Gleaning Euglenozoa-specific DNA polymerases in public single-cell transcriptome data

Transcriptome data sets of free-living diplomonads, Trepomonas sp. and Hexamita sp.

Microheliella maris possesses the most gene-rich mitochondrial genome in Diaphoretickes

A novel structural maintenance of chromosomes (SMC)-related protein family specific to Archaea

Comparative Plastid Genomics of Green-Colored Dinoflagellates Unveils Parallel Genome Compaction and RNA Editing

The closest lineage of Archaeplastida is revealed by phylogenomics analyses that include Microheliella maris.

Ubiquity and Origins of Structural Maintenance of Chromosomes (SMC) Proteins in Eukaryotes

Signs of the plastid: Enzymes involved in plastid-localized metabolic pathways in a eugregarine species.

Phage origin of mitochondrion-localized family A DNA polymerases in kinetoplastids and diplonemids.

Collaborators (3)

Hirokazu SAKAMOTO

Alexander Tice

Mattia Tiboni

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