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University of Exeter

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PhD Studentship: Allele-resolved genetics and epigenetics in type 2 diabetes University of Exeter in United Kingdom

Degree Level

PhD

Field of study

Computer Science

Funding

Available

Deadline

Dec 8, 2026

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Country

United Kingdom

University

University of Exeter

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Keywords

Computer Science
Biomedical Engineering
Biology
Medical Science
Salud Pública
Type 2 Diabetes
Genetic
Epigenetic
Long-read Sequencing
Statistics
Bioinformatic
Regulatory Genomics

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About this position

[Funding of fees plus a stipend of £21,805 per annum for 2026/7. Funded by the EPSRC Engineering and Physical Sciences Research Council.]

PhD Studentship at the University of Exeter: Allele-resolved genetics and epigenetics in type 2 diabetes

This funded PhD studentship explores how genetic variation alters gene regulation in type 2 diabetes (T2D), with a focus on pancreatic islets. The project addresses a major challenge in human genetics: disease-associated DNA changes often act through regulatory regions, and because individuals carry two parental copies of the genome, it can be difficult to identify which copy and which variant drives disease risk.

The research uses chromatin stencilling (Fiber-seq), a long-read sequencing approach that measures regulatory activity, epigenetic state, and genotype at the same time. This makes it possible to distinguish the two inherited genome copies and investigate copy-specific regulation in healthy and T2D donor islets. The project will generate high-resolution maps of DNA accessibility and methylation, identify regulatory protein binding sites, and connect these findings to disease-associated loci.

The successful student will join the Gene Regulatory Defects in Disease Group at the University of Exeter, an interdisciplinary environment combining laboratory genetics, epigenetics, long-read sequencing, bioinformatics, and data science. The studentship offers the chance to work with expert supervisors and collaborate with international researchers while helping to shape the direction of the project.

Key aims include generating chromatin stencilling maps from healthy pancreatic islet donors, targeting specific disease loci in selected T2D donors, and integrating these results with large-scale genetic resources such as the UK Biobank to improve interpretation of diabetes-associated variants. The resulting datasets and annotations are intended to be openly shared and to support the wider research community.

This is a fully funded PhD opportunity supported by the EPSRC Engineering and Physical Sciences Research Council. The studentship provides fees plus a stipend of £21,805 per annum for 2026/7. The deadline is 8 December 2026.

Applicants with interest in genetics, epigenetics, sequencing technologies, computational biology, or statistical genetics are likely to find the project especially relevant. The studentship is well suited to a candidate who wants research training across wet-lab and computational methods in a medically important area.

Funding details

Available

How to apply

Apply via the University of Exeter funding page using the application link provided. Submit the required materials before 2026-12-08. Review the full studentship page for any additional eligibility or document requirements.

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