Brian J. Enquist
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Recent Grants
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Collaborative Research: Developing integrated trait-based scaling theory to predict community change and forest function in light of global change
Open Date: 2015-08-01
Close Date: 2018-07-31
Grant: Close
Collaborative Research: Developing integrated trait-based scaling theory to predict community change and forest function in light of global change
Open Date: 2015-08-01
Close Date: 2018-07-31
Grant: Close
Dissertation Research: Do Venation Networks Match Plant Form, Function, and Evolution to Climate?
Open Date: 2012-09-01
Close Date: 2015-08-31
Grant: Close
Dissertation Research: Do Venation Networks Match Plant Form, Function, and Evolution to Climate?
Open Date: 2012-09-01
Close Date: 2015-08-31
Grant: Close
Collaborative Research: Experimental Macroecology: Effects of Temperature on Biodiversity
Open Date: 2011-08-01
Close Date: 2015-07-31
Articles (21)
Year:
2025
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2025
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2025
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2025
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2025
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2025
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2025
Aim Species occurrence data are valuable information that enables one to estimate geographical distributions, characterize niches and their evolution, and guide spatial conservation planning. Rapid increases in species occurrence data stem from increasing digitization and aggregation efforts, and citizen science initiatives. However, persistent quality issues in occurrence data can impact the accuracy of scientific findings, underscoring the importance of filtering erroneous occurrence records in biodiversity analyses. Innovation We introduce an R package, occTest, that synthesizes a growing open‐source ecosystem of biodiversity cleaning workflows to prepare occurrence data for different modelling applications. It offers a structured set of algorithms to identify potential problems with species occurrence records by employing a hierarchical organization of multiple tests. The workflow has a hierarchical structure organized in test Phases (i.e. cleaning vs. testing) that encompass different testBlocks grouping different testTypes (e.g. environmental outlier detection ), which may use different testMethods (e.g. Rosner test, jacknife, etc.). Four different testBlocks characterize potential problems in geographic, environmental, human influence and temporal dimensions. Filtering and plotting functions are incorporated to facilitate the interpretation of tests. We provide examples with different data sources, with default and user‐defined parameters. Compared to other available tools and workflows, occTest offers a comprehensive suite of integrated tests, and allows multiple methods associated with each test to explore consensus among data cleaning methods. It uniquely incorporates both coordinate accuracy analysis and environmental analysis of occurrence records. Furthermore, it provides a hierarchical structure to incorporate future tests yet to be developed. Main conclusions occTest will help users understand the quality and quantity of data available before the start of data analysis, while also enabling users to filter data using either predefined rules or custom‐built rules. As a result, occTest can better assess each record's appropriateness for its intended application.
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2024
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2024
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2024
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2023
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2023
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2023
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2023
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2023
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2023
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2023
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2023
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2023
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2023
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2023
Collaborators (50)
Giovanna Battipaglia
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Daniel Park
Assistant Professor
Purdue University
Jean‐Louis Doucet
-
Grant Harley
Associate Professor
University of Idaho
Achim Bräuning
-
Hans Henrik Bruun
associate professor
University of Copenhagen
Nathan J. B. Kraft
-
Rachael Gallagher
Macquarie University
James H. Speer
Professor
Indiana State University
Vigdis Vandvik
Professor
University of Bergen
Alicia Gómez-Fernández
Assistant Proffesor
Centro de Investigación en Biodiversidad y Cambio Global CIBC-UAM
Josep M Serra-Diaz
Research Assistant Professor
University of Connecticut
Valerie Trouet
-
Julia Chacón-Labella
Universidad Autónoma de Madrid
Kristine Birkeli
University of Bergen
Wolf Eiserhardt
Associate Professor
Aarhus University
John Poulsen
Adjunct Professor
Duke University
Bogdan Jaroszewicz
Head of the Station/Professor
University of Warsaw
Jane Catford
King’s College London
Cory Merow
-
Daniel S. Falster
-
Ingo Heinrich
Humboldt-Universität zu Berlin
Alexander Keller
Professor
Ludwig-Maximilians-Universität München
Patrick Finnegan
University of Western Australia
Helge Bruelheide
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Emil Cienciala
Global Change Research Institute CAS
Clara Antón-Fernández
Research Professor
Norwegian Institute of Bioeconomy Research
Raúl Sánchez-Salguero
Associate Professor
Universidad Pablo de Olavide
Marcin Koprowski
Nicolaus Copernicus University
Julia Kemppinen
University of Oulu
Kathelyn Paredes-Villanueva
Columbia University
Simon Hart
Lecturer
University of Queensland
Caterina Penone
-
Sebastian Kepfer Rojas
Københavns Universitet
Joshua Lynn
The University of Manchester
Adam R. Martin
-
Dana Royer
Wesleyan University
Vivian Kvist Johannsen
Københavns Universitet
Franziska Schrodt
Assistant Professor
University of Nottingham
Yongjiang Zhang
Assistant Professor
University of Maine
Rubén Delgado Manzanedo
Assistant Professor
University of Bern
Eurídice Nora Honorio Coronado
University of St. Andrews
Stanisław Miścicki
Prof., Head of Department
Szkola Glowna Gospodarstwa Wiejskiego
Denis Vile
Deputy head
INRAE
Richard Telford
University of Bergen
Hans ter Steege
Professor by Special Appointment
Utrecht University
Tommaso Jucker
University of Bristol
Pieter Zuidema
Professor
Wageningen Universiteit
Daniela Granato-Souza
Assistant Professor
Alabama A&M University
Pekka Niittynen
University of Jyväskylä
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