Brian J. Enquist

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Collaborative Research: Developing integrated trait-based scaling theory to predict community change and forest function in light of global change

Open Date: 2015-08-01

Close Date: 2018-07-31

Grant: Close

Collaborative Research: Developing integrated trait-based scaling theory to predict community change and forest function in light of global change

Open Date: 2015-08-01

Close Date: 2018-07-31

Grant: Close

Dissertation Research: Do Venation Networks Match Plant Form, Function, and Evolution to Climate?

Open Date: 2012-09-01

Close Date: 2015-08-31

Grant: Close

Dissertation Research: Do Venation Networks Match Plant Form, Function, and Evolution to Climate?

Open Date: 2012-09-01

Close Date: 2015-08-31

Grant: Close

Collaborative Research: Experimental Macroecology: Effects of Temperature on Biodiversity

Open Date: 2011-08-01

Close Date: 2015-07-31

Articles (21)

Year:

2025

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2025

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2025

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2025

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2025

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2025

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2025

Aim Species occurrence data are valuable information that enables one to estimate geographical distributions, characterize niches and their evolution, and guide spatial conservation planning. Rapid increases in species occurrence data stem from increasing digitization and aggregation efforts, and citizen science initiatives. However, persistent quality issues in occurrence data can impact the accuracy of scientific findings, underscoring the importance of filtering erroneous occurrence records in biodiversity analyses. Innovation We introduce an R package, occTest, that synthesizes a growing open‐source ecosystem of biodiversity cleaning workflows to prepare occurrence data for different modelling applications. It offers a structured set of algorithms to identify potential problems with species occurrence records by employing a hierarchical organization of multiple tests. The workflow has a hierarchical structure organized in test Phases (i.e. cleaning vs. testing) that encompass different testBlocks grouping different testTypes (e.g. environmental outlier detection ), which may use different testMethods (e.g. Rosner test, jacknife, etc.). Four different testBlocks characterize potential problems in geographic, environmental, human influence and temporal dimensions. Filtering and plotting functions are incorporated to facilitate the interpretation of tests. We provide examples with different data sources, with default and user‐defined parameters. Compared to other available tools and workflows, occTest offers a comprehensive suite of integrated tests, and allows multiple methods associated with each test to explore consensus among data cleaning methods. It uniquely incorporates both coordinate accuracy analysis and environmental analysis of occurrence records. Furthermore, it provides a hierarchical structure to incorporate future tests yet to be developed. Main conclusions occTest will help users understand the quality and quantity of data available before the start of data analysis, while also enabling users to filter data using either predefined rules or custom‐built rules. As a result, occTest can better assess each record's appropriateness for its intended application.

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2024

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2024

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2024

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2023

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2023

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2023

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2023

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2023

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2023

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2023

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2023

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2023

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2023

Year:

2023

Collaborators (50)

Giovanna Battipaglia

-

ITALY
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Daniel Park

Assistant Professor

Purdue University

UNITED STATES
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Jean‐Louis Doucet

-

BELGIUM
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Grant Harley

Associate Professor

University of Idaho

UNITED STATES
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Achim Bräuning

-

GERMANY
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Hans Henrik Bruun

associate professor

University of Copenhagen

DENMARK
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Nathan J. B. Kraft

-

UNITED STATES
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Rachael Gallagher

Macquarie University

AUSTRALIA
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James H. Speer

Professor

Indiana State University

UNITED STATES
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Vigdis Vandvik

Professor

University of Bergen

NORWAY
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Alicia Gómez-Fernández

Assistant Proffesor

Centro de Investigación en Biodiversidad y Cambio Global CIBC-UAM

SPAIN
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Josep M Serra-Diaz

Research Assistant Professor

University of Connecticut

UNITED STATES
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Valerie Trouet

-

UNITED STATES
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Julia Chacón-Labella

Universidad Autónoma de Madrid

SPAIN
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Kristine Birkeli

University of Bergen

NORWAY
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Wolf Eiserhardt

Associate Professor

Aarhus University

DENMARK
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John Poulsen

Adjunct Professor

Duke University

UNITED STATES
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Bogdan Jaroszewicz

Head of the Station/Professor

University of Warsaw

POLAND
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Jane Catford

King’s College London

UNITED KINGDOM
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Cory Merow

-

UNITED STATES
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Daniel S. Falster

-

AUSTRALIA
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Ingo Heinrich

Humboldt-Universität zu Berlin

GERMANY
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Alexander Keller

Professor

Ludwig-Maximilians-Universität München

GERMANY
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Patrick Finnegan

University of Western Australia

AUSTRALIA
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Helge Bruelheide

-

GERMANY
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Emil Cienciala

Global Change Research Institute CAS

CZECH REPUBLIC
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Clara Antón-Fernández

Research Professor

Norwegian Institute of Bioeconomy Research

NORWAY
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Raúl Sánchez-Salguero

Associate Professor

Universidad Pablo de Olavide

SPAIN
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Marcin Koprowski

Nicolaus Copernicus University

POLAND
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Julia Kemppinen

University of Oulu

FINLAND
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Kathelyn Paredes-Villanueva

Columbia University

UNITED STATES
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Simon Hart

Lecturer

University of Queensland

AUSTRALIA
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Caterina Penone

-

SWITZERLAND
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Sebastian Kepfer Rojas

Københavns Universitet

DENMARK
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Joshua Lynn

The University of Manchester

UNITED KINGDOM
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Adam R. Martin

-

CANADA
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Dana Royer

Wesleyan University

UNITED STATES
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Vivian Kvist Johannsen

Københavns Universitet

DENMARK
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Franziska Schrodt

Assistant Professor

University of Nottingham

UNITED KINGDOM
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Yongjiang Zhang

Assistant Professor

University of Maine

UNITED STATES
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Rubén Delgado Manzanedo

Assistant Professor

University of Bern

SWITZERLAND
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Eurídice Nora Honorio Coronado

University of St. Andrews

UNITED KINGDOM
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Stanisław Miścicki

Prof., Head of Department

Szkola Glowna Gospodarstwa Wiejskiego

POLAND
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Denis Vile

Deputy head

INRAE

FRANCE
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Richard Telford

University of Bergen

NORWAY
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Hans ter Steege

Professor by Special Appointment

Utrecht University

NETHERLANDS
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Tommaso Jucker

University of Bristol

UNITED KINGDOM
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Pieter Zuidema

Professor

Wageningen Universiteit

NETHERLANDS
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Daniela Granato-Souza

Assistant Professor

Alabama A&M University

UNITED STATES
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Pekka Niittynen

University of Jyväskylä

FINLAND
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