Jacob Agerbo Rasmussen

Københavns Universitet

Denmark

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Professors in Microbiology

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Articles (20)

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2025

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2023

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2023

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2022

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2022

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2022

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2022

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2022

Collaborators (20)

David Boertmann

Aarhus University

DENMARK

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Asmus Toftkær Muurmann

Aalborg University

DENMARK

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Shyam Gopalakrishnan

Københavns Universitet

DENMARK

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Sabina Leanti La Rosa

Associate Professor in Microbiology

Norwegian University of Life Sciences

NORWAY

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Glenn Yannic

Associate Professor

Université Savoie Mont-Blanc

FRANCE

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Antton Alberdi

Associate Professor

University of Copenhagen

DENMARK

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Louise von Gersdorff Jørgensen

Københavns Universitet

DENMARK

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Naia Morueta-Holme

Københavns Universitet

DENMARK

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Nolwenn Marie Dheilly

Head of the Pathogen Discovery laboratory

Institut Pasteur

FRANCE

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Morten T. Limborg

Københavns Universitet

DENMARK

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Xin Sun

Københavns Universitet

DENMARK

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Anders Miki Bojesen

Professor

University of Copenhagen

DENMARK

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Lone Gram

Technical University of Denmark

DENMARK

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Simon Bahrndorff

Aalborg University

DENMARK

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Snæbjörn Pálsson

ICELAND

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Marcus Gilbert

Københavns Universitet

DENMARK

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Michael Martin

Associate Professor

Norwegian University of Science and Technology (NTNU)

NORWAY

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Scott Jarmusch

Technical University of Denmark

DENMARK

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Ruairidh James Hay Sawers

Assistant Professor

Pennsylvania State University

UNITED STATES

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Christopher Barnes

Aarhus University

DENMARK

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Jacob Agerbo Rasmussen

Research Interests

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Articles (20)

HoloFood Data Portal: holo-omic datasets for analysing host–microbiota interactions in animal production

A bacterial and viral genome catalogue from Atlantic salmon highlights diverse gut microbiome compositions at pre- and post-smolt life stages

A holo-omics analysis shows how sugar kelp can boost gut health in Atlantic salmon

Growth and metabolic performance of house fly and black soldier fly larvae differ across densities and waste-based growth substrates

The overlooked biodiversity loss

Succession of microbial community composition and secondary metabolism during marine biofilm development

Ancient reindeer mitogenomes reveal island-hopping colonisation of the Arctic archipelagos

A zebrafish model to elucidate the impact of host genes on the microbiota

Intestinal microbial profiles of wild Alaskan rainbow trout (Oncorhynchus mykiss) characterized by 16S rRNA amplicon data

Genomic and functional characterization of the Atlantic salmon gut microbiome in relation to nutrition and health

Unexpected fishy microbiomes

Co-diversification of an intestinal Mycoplasma and its salmonid host

Genome-resolving metagenomics reveals wild western capercaillies (Tetrao urogallus) as avian hosts for antibiotic-resistance bacteria and their interactions with the gut-virome community

Genomic diversity and differentiation between island and mainland populations of white-tailed eagles (Haliaeetus albicilla)

Microbiome “Inception”: an Intestinal Cestode Shapes a Hierarchy of Microbial Communities Nested within the Host

A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive in rainbow trout (Oncorhynchus mykiss)

A strategic model of a host-microbe-microbe system reveals the importance of a joint host-microbe immune response to combat stress-induced gut dysbiosis

Rhizospherebacterial communities differ among traditional maize landraces

Genomic evidence refutes the hypothesis that the Bornean banteng is a distinct species

Integrative analyses of probiotics, pathogenic infections and host immune response highlight the importance of gut microbiota in understanding disease recovery in rainbow trout (Oncorhynchus mykiss)

Collaborators (20)

David Boertmann

Asmus Toftkær Muurmann

Shyam Gopalakrishnan

Sabina Leanti La Rosa

Glenn Yannic

Antton Alberdi

Louise von Gersdorff Jørgensen

Naia Morueta-Holme

Nolwenn Marie Dheilly

Morten T. Limborg

Xin Sun

Anders Miki Bojesen

Lone Gram

Simon Bahrndorff

Snæbjörn Pálsson

Marcus Gilbert

Michael Martin

Scott Jarmusch

Ruairidh James Hay Sawers

Christopher Barnes

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