Joseph Nesme

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Københavns Universitet

Denmark

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Professors in Microbiology

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Recent Grants

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Catch me if you conjugate! Plasmid recovery from complex ecosystems using secreted pilus machinery as a hook

Open Date: 2020-01-01

Close Date: 2022-12-01

Articles (23)

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Collaborators (27)

Jakob Stokholm

Københavns Universitet

DENMARK

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Sergei Kliver

University of Copenhagen

DENMARK

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Rita Grosch

Head of Department

Leibniz Institute of Vegetable and Ornamental Crops (IGZ)

GERMANY

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Vaughn Cooper

Professor

University of Pittsburgh

UNITED STATES

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Heiko T. Kiesewalter

Københavns Universitet

DENMARK

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Urvish Trivedi

Københavns Universitet

DENMARK

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Lone Brøndsted

Københavns Universitet

DENMARK

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Lars Hestbjerg Hansen

Københavns Universitet

DENMARK

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Benjamin Heyde

Ruhr-Universität Bochum

GERMANY

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Manuel Banzhaf

University of Birmingham

UNITED KINGDOM

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Morten Arendt Rasmussen

Københavns Universitet

DENMARK

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Mette Vestergård

Aarhus University

DENMARK

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Nan Yang

Københavns Universitet

DENMARK

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Arnaud Dechesne

Technical University of Denmark

DENMARK

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Mads Frederik Hansen

Københavns Universitet

DENMARK

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Søren Sørensen

Københavns Universitet

DENMARK

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Valentine Cyriaque

Københavns Universitet

DENMARK

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Danesh Moradigaravand

Lecturer in Bioinformatics

University of Birmingham

UNITED KINGDOM

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Kevin Foster

University of Oxford

UNITED KINGDOM

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Veronika Theresa Lutz

University of Copenhagen

DENMARK

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Peter Fineran

Professor

University of Otago

NEW ZEALAND

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Morten Kam Dahl Dueholm

Aalborg University

DENMARK

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Jan-Ulrich Kreft

University of Birmingham

UNITED KINGDOM

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Jonas Stenløkke Madsen

Københavns Universitet

DENMARK

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Mette Burmølle

Associate Professor

University of Copenhagen

DENMARK

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Peter Schröder

Prof. / Senior Plant Physiologist

Technical University of Munich

GERMANY

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Witold Kot

Københavns Universitet

DENMARK

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Joseph Nesme

Research Interests

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Recent Grants

Articles (23)

Birmingham-group IncP-1α plasmids revisited: RP4, RP1 and RK2 are identical and their remnants can be detected in environmental isolates

A chromosome phased diploid genome assembly of African hunting dog (<i>Lycaon pictus</i>)

Unfolding the collective functional potential of a synergistic multispecies community through genotypic and phenotypic analyses

Enzymatic exposure impacts microbial diversity and reduces biovolume of reverse osmosis membrane-associated biofilms

Insights into the ecology of the infant gut plasmidome

Single-cell RNA sequencing reveals plasmid constrains bacterial population heterogeneity and identifies a non-conjugating subpopulation

Interspecific interactions facilitate keystone species in a multispecies biofilm that promotes plant growth

Characterization and Abundance of Plasmid-Dependent Alphatectivirus Bacteriophages

Co-localization of antibiotic resistance genes is widespread in the infant gut microbiome and associates with an immature gut microbial composition

Deciphering the Key Players of the Bacterial Microbiota Associated with Aerial Crown Gall Tumors on Rhododendron

Horizontal transmission of a multidrug-resistant IncN plasmid isolated from urban wastewater

Insights into the circular

Plasmid permissiveness of wastewater microbiomes can be predicted from 16S rRNA sequences by machine learning

Draft genomes of seven isolates from Danish wastewater facilities belonging to Pseudomonas, Bacillus, Pseudochrobactrum, Brevundimonas, and Pandoraea

Influence of sewage sludge stabilization method on microbial community and the abundance of antibiotic resistance genes

Long-Term Fertilization Strategy Impacts Rhizoctonia solani–Microbe Interactions in Soil and Rhizosphere and Defense Responses in Lettuce

CRISPR-Cas systems are widespread accessory elements across bacterial and archaeal plasmids

Biosolids for safe land application: does wastewater treatment plant size matters when considering antibiotics, pollutants, microbiome, mobile genetic elements and associated resistance genes?

A novel and affordable bioaugmentation strategy with microbial extracts to accelerate the biodegradation of emerging contaminants in different media

Biofilm cultivation facilitates coexistence and adaptive evolution in an industrial bacterial community

Deciphering bacteria associated with a pre-parasitic stage of the root-knot nematode Meloidogyne hapla in nemato-suppressive and nemato-conducive soils

Exudates from Miscanthus x giganteus change the response of a root-associated Pseudomonas putida strain towards heavy metals

Importance of substrate quality and clay content on microbial extracellular polymeric substances production and aggregate stability in soils

Collaborators (27)

Jakob Stokholm

Sergei Kliver

Rita Grosch

Vaughn Cooper

Heiko T. Kiesewalter

Urvish Trivedi

Lone Brøndsted

Lars Hestbjerg Hansen

Benjamin Heyde

Manuel Banzhaf

Morten Arendt Rasmussen

Mette Vestergård

Nan Yang

Arnaud Dechesne

Mads Frederik Hansen

Søren Sørensen

Valentine Cyriaque

Danesh Moradigaravand

Kevin Foster

Veronika Theresa Lutz

Peter Fineran

Morten Kam Dahl Dueholm

Jan-Ulrich Kreft

Jonas Stenløkke Madsen

Mette Burmølle

Peter Schröder

Witold Kot

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