Sanne Abeln

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University of Amsterdam

Netherlands

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Recent Grants

Grant: Close

MIRIADE

Open Date: 2019-11-01

Close Date:

Grant: Close

Understanding toxic protein oligomers through ensemble characteristics

Open Date: 2011-11-01

Close Date: 2015-10-30

Grant: Close

Binding Mechanisms of Natively Disordered Proteins

Open Date: 2007-04-01

Close Date: 2008-03-31

Articles (26)

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Collaborators (23)

Stian Soiland-Reyes

Senior Lecturer

The University of Manchester

UNITED KINGDOM

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Gerrit Meijer

Professor of Oncologic Pathology

University Medical Center Groningen

NETHERLANDS

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Pieter Jelle Visser

Karolinska Institutet

SWEDEN

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Dea Gogishvili

University of Amsterdam

NETHERLANDS

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Katharina Waury

Vrije Universiteit Amsterdam

NETHERLANDS

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gijs wuite

University of Amsterdam

NETHERLANDS

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Alexandru Iosup

University of Amsterdam

NETHERLANDS

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Charlotte Teunissen

University of Amsterdam

NETHERLANDS

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Lisa Vermunt

University of Amsterdam

NETHERLANDS

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Eva Illes-Toth

University College London Hospitals NHS Foundation Trust

UNITED KINGDOM

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Christophe Hirtz

professor

University of Montpellier

FRANCE

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Eline A. J. Willemse

NETHERLANDS

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Alexander Buell

Technical University of Denmark

DENMARK

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Hlin Kvartsberg

Senior clinical chemist, head of the assay development section

Skåne University Hospital

SWEDEN

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Remond J.A. Fijneman

University Medical Center Groningen

NETHERLANDS

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Alexander Schönhuth

Bielefeld University

GERMANY

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Hossein Mohammad-Beigi

Technical University of Denmark

DENMARK

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Soumik Ray

Technical University of Denmark

DENMARK

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Anton Feenstra

Vrije Universiteit Amsterdam

NETHERLANDS

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Suzanne Miedema

University of Amsterdam

NETHERLANDS

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Jacob Larsen

Technical University of Denmark

DENMARK

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Elly M. Hol

NETHERLANDS

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Soufyan Lakbir

University of Amsterdam

NETHERLANDS

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Sanne Abeln

Research Interests

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Recent Grants

Articles (26)

Probing the effect of the disordered flank regions on amyloid fibril growth and proliferation

Probing the effect of the disordered flank regions on amyloid fibril growth and proliferation

Data‐driven evaluation of suitable immunogens for improved antibody selection

Neurofilament Light Chain under the Lens of Structural Mass Spectrometry

Tumor break load quantitates structural variant-associated genomic instability with biological and clinical relevance across cancers

Comparison of sequence- and structure-based antibody clustering approaches on simulated repertoire sequencing data

FAIR data for optical tweezers experiments

CIBRA identifies genomic alterations with a system-wide impact on tumor biology

The GFAP proteoform puzzle: How to advance GFAP as a fluid biomarker in neurological diseases

The immunological landscape of peripheral blood in glioblastoma patients and immunological consequences of age and dexamethasone treatment.

Structural flexibility and heterogeneity of recombinant human glial fibrillary acidic protein (GFAP)

Proteome encoded determinants of protein sorting into extracellular vesicles

High Prevalence of Chromosomal Rearrangements and LINE Retrotranspositions Detected in Formalin-Fixed, Paraffin-Embedded Colorectal Cancer Tissue

Considerations in the search for epistasis

Clusters of co-abundant proteins in the brain cortex associated with fronto-temporal lobar degeneration

Methods to discover and validate biofluid-based biomarkers in neurodegenerative dementias

Discovery of novel CSF biomarkers to predict progression in dementia using machine learning

Deciphering Protein Secretion from the Brain to Cerebrospinal Fluid for Biomarker Discovery.

Tumour break load is a biologically relevant feature of genomic instability with prognostic value in colorectal cancer

How sticky are our proteins? Quantifying hydrophobicity of the human proteome

Therapeutic potential of compounds targeting SARS-CoV-2 helicase

INFLECT

Bioinformatics tools and data resources for assay development of fluid protein biomarkers

Multi-task learning to leverage partially annotated data for PPI interface prediction

Methods Included: Standardizing Computational Reuse and Portability with the Common Workflow Language

PIPENN: protein interface prediction from sequence with an ensemble of neural nets

Collaborators (23)

Stian Soiland-Reyes

Gerrit Meijer

Pieter Jelle Visser

Dea Gogishvili

Katharina Waury

gijs wuite

Alexandru Iosup

Charlotte Teunissen

Lisa Vermunt

Eva Illes-Toth

Christophe Hirtz

Eline A. J. Willemse

Alexander Buell

Hlin Kvartsberg

Remond J.A. Fijneman

Alexander Schönhuth

Hossein Mohammad-Beigi

Soumik Ray

Anton Feenstra

Suzanne Miedema

Jacob Larsen

Elly M. Hol

Soufyan Lakbir

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