Sébastian Lequime

Assistant Professor

Rijksuniversiteit Groningen

Netherlands

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About

Dr. Sébastian Lequime is an Assistant Professor at Rijksuniversiteit Groningen in the Netherlands. His research focuses on viral phylogeography, the detection of endogenous viral elements, and the transmission dynamics of vector-borne viruses. His recent work includes studies on Aedes mosquitoes, dengue virus, and the ecological impacts of viral elements in various hosts.

Articles (17)

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2025

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2022

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2022

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2022

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2021

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2021

Collaborators (22)

Matthias Budt

Robert Koch Institute

GERMANY

Sébastian Lequime

Research Interests

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About

Articles (17)

Comparative performance of viral landscape phylogeography approaches

detectEVE: Fast, Sensitive and Precise Detection of Endogenous Viral Elements in Genomic Data

Dengue-mediated changes in the vectorial capacity of Aedes aegypti (Diptera: Culicidae): manipulation of transmission or infection by-product?

Endogenous viral elements: insights into data availability and accessibility

A tale of caution: How endogenous viral elements affect virus discovery in transcriptomic data

Highly divergent CRESS DNA and picorna-like viruses associated with bleached thalli of the green seaweed Ulva

Phylogeographic analysis of dengue virus serotype 1 and cosmopolitan serotype 2 in Africa

Chikungunya intra-vector dynamics in Aedes albopictus from Lyon (France) upon exposure to a human viremia-like dose range reveals vector barrier’s permissiveness and supports local epidemic potential

The sociality continuum of viruses: a commentary on Leeks et al. 2023

Endogenous viral elements in shrew genomes provide insights into Pestivirus ancient history

Aquatic Flaviviruses

The Viral Susceptibility of the Haloferax Species

Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic

Innate immune pathways act synergistically to constrain RNA virus evolution in Drosophila melanogaster

Mutational analysis of Aedes aegypti Dicer 2 provides insights into the biogenesis of antiviral exogenous small interfering RNAs

Molecular detection and genomic characterization of diverse hepaciviruses in African rodents

Recent African strains of Zika virus display higher transmissibility and fetal pathogenicity than Asian strains

Collaborators (22)

Matthias Budt

Tessa Quax

Maxime Ratinier

claire valiente moro

Sophie Gryseels

Artem Baidaliuk

Vincent RAQUIN

Thomas Hackl

Louis Lambrechts

Anne Willems

Caroline Manet

Oliver Pybus

Stefano Catalano

Ine Boonen

Albin Fontaine

Nadja Brait

Alexander Khromykh

Verena Schuenemann

Frédérick Arnaud

Philippe Lemey

Margus Varjak

Maria-Carla Saleh

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