Shuto Hayashi

Associate Professor

Tokyo Medical and Dental University

Japan

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Articles (17)

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2023

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2023

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2020

Collaborators (32)

Genta Nagae

Project Associate Professor

University of Tokyo

JAPAN

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Rebecca Dagg

University of Oxford

UNITED KINGDOM

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Jakob S Pedersen

Aarhus University

DENMARK

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Makoto Nakakido

Lecturer

University of Tokyo

JAPAN

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Sebastian Waszak

Associate Adjunct Professor

University of California, San Francisco

UNITED STATES

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Kirsten Kübler

University Hospital Bonn

GERMANY

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Lynn Fink

AUSTRALIA

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Shogo Senga

Taisho Pharmaceutical (Japan)

JAPAN

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Natalie Saini

Assistant Professor

Medical University of South Carolina

UNITED STATES

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Guanlan Dong

Harvard University

UNITED STATES

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Keiran Raine

Head of Clinical Computational Research Informatics

UNITED KINGDOM

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Emilie Lalonde

Assistant professor

University of Western Ontario

CANADA

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Ian Davis

Professor

University of North Carolina at Chapel Hill School of Medicine

UNITED STATES

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Justin Whalley

University of Oxford

UNITED KINGDOM

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Marina Pajic

Laboratory Head (Faculty), Personalised Cancer Therapeutics Lab

Garvan Institute of Medical Research

AUSTRALIA

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Karin Kassahn

Affiliate Associate Professor

University of Adelaide

AUSTRALIA

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Chao Li

The University of Manchester

UNITED KINGDOM

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Dale Garsed

University of Melbourne

AUSTRALIA

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Maxime Tarabichi

Université libre de Bruxelles

BELGIUM

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Akira Sugiyama

Asisstant professor

University of Tokyo

JAPAN

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Brian O'Connor

Chief Data Officer

UNITED STATES

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David Ocana

European Bioinformatics Institute

UNITED KINGDOM

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Joachim Weischenfeldt

Professor

University of Copenhagen

DENMARK

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Roelof Koster

Netherlands Cancer Institute-Antoni van Leeuwenhoek Hospital

NETHERLANDS

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Johanna Bertl

Aarhus University

DENMARK

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Faraz Hach

The University of British Columbia

CANADA

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Francesco Favero

Københavns Universitet

DENMARK

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George Bova

Professor

University of Tampere

FINLAND

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Colin Purdie

Honorary Professor

University of Dundee

UNITED KINGDOM

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Carl Herrmann

Prof. Dr. at Heidelberg University

Heidelberg University

GERMANY

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Sergei Yakneen

Chief Technology Officer

UNITED KINGDOM

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Ashton Connor

Houston Methodist

UNITED STATES

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Shuto Hayashi

Research Interests

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Articles (17)

Analyzing Antibody Repertoire Using Next-Generation Sequencing and Machine Learning

Spatial and single-cell transcriptomics decipher the cellular environment containing HLA-G plus cancer cells and SPP1+macrophages in colorectal cancer

Subclonal accumulation of immune escape mechanisms in microsatellite instability-high colorectal cancers

Topological data analysis of protein structure and inter/intra-molecular interaction changes attributable to amino acid mutations

Nucleic acid-triggered tumoral immunity propagates pH-selective therapeutic antibodies through tumor-driven epitope spreading

Nucleic acid–triggered tumoral immunity propagates pH-selective therapeutic antibodies through tumor-driven epitope spreading

Bayesian statistical method for detecting structural and topological diversity in polymorphic proteins.

Bayesian statistical method for detecting structural and topological diversity in polymorphic proteins

Immunogenomic pan-cancer landscape reveals immune escape mechanisms and immunoediting histories.

Immunogenomic pan-cancer landscape reveals immune escape mechanisms and immunoediting histories

Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples.

Sex differences in oncogenic mutational processes.

Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis

Combined burden and functional impact tests for cancer driver discovery using DriverPower

A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns.

Neoantimon: a multifunctional R package for identification of tumor-specific neoantigens.

Classification of primary liver cancer with immunosuppression mechanisms and correlation with genomic alterations.

Collaborators (32)

Genta Nagae

Rebecca Dagg

Jakob S Pedersen

Makoto Nakakido

Sebastian Waszak

Kirsten Kübler

Lynn Fink

Shogo Senga

Natalie Saini

Guanlan Dong

Keiran Raine

Emilie Lalonde

Ian Davis

Justin Whalley

Marina Pajic

Karin Kassahn

Chao Li

Dale Garsed

Maxime Tarabichi

Akira Sugiyama

Brian O'Connor

David Ocana

Joachim Weischenfeldt

Roelof Koster

Johanna Bertl

Faraz Hach

Francesco Favero

George Bova

Colin Purdie

Carl Herrmann

Sergei Yakneen

Ashton Connor

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