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Wonyong Kim
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Associate Professor
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About
Wonyong Kim is an Associate Professor at Sunchon National University in South Korea. His research encompasses various areas, including polyketide production, fungal biology, and the impact of climatic variables on mycobiome composition. Recent publications highlight his work on antimicrobial compounds, cancer cell behavior, and the regulatory mechanisms of sexual reproduction in fungi.
Recent Grants
Grant: Open
Fungal cell factory engineering for production of value-added natural products derived from unculturable microorganisms using agricultural wastes
Open Date: 2022-03-01
Close Date: 2027-02-01
Grant: Close
Genome-wide profiling of RNA N6-methyladenosine methylation and its role during sexual development in filamentous fungi
Open Date: 2019-06-01
Close Date: 2022-05-01
Grant: Close
Collaborative Research: Evolution of Systems Biology Underlying Fruiting Body Development in Fungi
Open Date: 2015-05-15
Close Date: 2018-04-30
Articles (22)
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2026
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2025
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2025
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2025
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2025
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2025
In eukaryotes, N 6 -methyladenosine (m 6 A) RNA modification plays a crucial role in governing the fate of RNA molecules and has been linked to various developmental processes. However, the phyletic distribution and functions of genetic factors responsible for m 6 A modification remain largely unexplored in fungi. To get insights into the evolution of m 6 A machineries, we reconstructed global phylogenies of potential m 6 A writers, readers, and erasers in fungi. Substantial copy number variations were observed, ranging from up to five m 6 A writers in early-diverging fungi to a single copy in the subphylum Pezizomycotina, which primarily comprises filamentous fungi. To characterize m 6 A factors in a phytopathogenic fungus Fusarium graminearum , we generated knockout mutants lacking potential m 6 A factors including the sole m 6 A writer MTA1 . However, the resulting knockouts did not exhibit any noticeable phenotypic changes during vegetative and sexual growth stages. As obtaining a homozygous knockout lacking MTA1 was likely hindered by its essential role, we generated MTA1 -overexpressing strains ( MTA1 -OE). The MTA1 -OE5 strain showed delayed conidial germination and reduced hyphal branching, suggesting its involvement during vegetative growth. Consistent with these findings, the expression levels of MTA1 and a potential m 6 A reader YTH1 were dramatically induced in germinating conidia, followed by the expression of potential m 6 A erasers at later vegetative stages. Several genes including transcription factors, transporters, and various enzymes were found to be significantly upregulated and downregulated in the MTA1 -OE5 strain. Overall, our study highlights the functional importance of the m 6 A methylation during conidial germination in F. graminearum and provides a foundation for future investigations into m 6 A modification sites in filamentous fungi. IMPORTANCE N 6 -methyladenosine (m 6 A) RNA methylation is a reversible posttranscriptional modification that regulates RNA function and plays a crucial role in diverse developmental processes. This study addresses the knowledge gap regarding phyletic distribution and functions of m 6 A factors in fungi. The identification of copy number variations among fungal groups enriches our knowledge regarding the evolution of m 6 A machinery in fungi. Functional characterization of m 6 A factors in a phytopathogenic filame
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2024
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2024
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2024
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2024
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2024
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2023
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2023
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2023
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2023
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2022
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2022
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2022
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2022
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2021
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2021
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2021
Collaborators (50)
Christian Zimmermann
TU Wien
Alexey Gurevich
Group Leader
Saarland University
Taifo Mahmud
Professor
Oregon State University
Tânia Keiko Shishido Joutsen
University of Helsinki
Martin Steinegger
Assistant Professor
Seoul National University
Thomas Tørring
Associate Professor
Aarhus University
Shravan Dommaraju
University of California, San Diego
Dongsoo Yang
Assistant Professor
Korea University
Juan Pablo Gomez-Escribano
Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures
Luis C. Branco
Principal Investigator
Universidade de Aveiro
Max Crüsemann
Professor
Goethe University Frankfurt
Jethro Hemmann
Junior Group Leader
Leibniz Institute for Natural Product Research and Infection Biology
Paul Michael D'Agostino
Senior Scientist
Helmholtz Institute for Pharmaceutical Research Saarland
Francisco Barona Gómez
Associate professor
Universiteit Leiden Instituut Biologie Leiden
Katherine R. Duncan
Senior Lecturer
Newcastle University
Martin Baunach
University of Bonn
Karina Gabriela Gutierrez-Garcia
Assistant Professor
University of Arizona
Claudio Greco
Senior Lecturer
Swansea University
Simon Sieber
University of Zurich
Novriyandi Hanif
Assistant Professor
Institut Pertanian Bogor
Nicole Avalon
Assistant Professor
University at Buffalo School of Pharmacy and Pharmaceutical Sciences
Thomas James Booth
Danmarks Tekniske Universitet The Novo Nordisk Foundation Center for Biosustainability
Yit-Heng Chooi
University of Western Australia
Seung-Yoon Oh
Associate Professor
Changwon National University
Kyo Bin Kang
Associate Professor
Sookmyung Women's University
Eva C. Sonnenschein
Professor
Swansea University
Adriano Rutz
ETH Zürich
Kai Blin
Technical University of Denmark
Douglas Mitchell
William Kelly Warren Sr. Professor of Biochemistry
Vanderbilt University
Chang-Young Jang
Professor
Sookmyung Women's University
Thanh-Hau Huynh
ETH Zürich
Kristina Haslinger
Scientific Staff, Associate Professor, Universitair hoofddocent
Rijksuniversiteit Groningen
Jaclyn Winter
Associate Professor
University of Utah
Nicolau Sbaraini
University in Western Australia
Tilmann Weber
Professor
Technical University of Denmark
Bohdan Ostash
Principal Investigator
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Cuauhtemoc Licona-Cassani
National Autonomous University of Mexico
Jeffrey Townsend
Professor
Yale School of Public Health
Robert Kalkreuter
Assistant Professor
Florida State University
Hyun Park
Professor
Korea University
Darren Holland
Griffith University
Ludek Sehnal
Head and PI
Masaryk University
Eric J. N. Helfrich
Professor of Natural Product Genomics
Goethe University Frankfurt
Victor J Carrion
Assistant Professor
Universiteit Leiden Instituut Biologie Leiden
Mitja Maximilian Zdouc
Universität Wien
Jerome Collemare
Group leader
Westerdijk Fungal Biodiversity Institute
Yohei Katsuyama
associate professor
The Univeristy of Tokyo
Jelle Dillen
Senior researcher
University of Antwerp
Nika Sokolova
ETH Zürich
Katherine Williams
Senior Lecturer
University of the West of England
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