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Florian Altermatt

4 months ago

Postdoc in Analytical Pipelines and eDNA Analyses for Invasive Alien Species in Aquatic Systems University of Zurich in Switzerland

Degree Level

Postdoc

Field of study

Computer Science

Funding

2-year postdoctoral position. No stipend amount or tuition details are mentioned.

Deadline

Expired

Country flag

Country

Switzerland

University

University of Zurich

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Keywords

Computer Science
Environmental Science
Biology
Invasive Species Management
Biodiversity
Earth Science
Freshwater Ecology
Metabarcoding
Statistics
Environmental Dna
Bioinformatic

About this position

Postdoctoral opening in the group of Florian Altermatt at the University of Zurich / Eawag in aquatic ecology, environmental DNA (eDNA), and invasive alien species (IAS). The project focuses on developing analytical pipelines and analyses to survey invasive species in aquatic systems using existing eDNA datasets.

The initial geographic focus is Central Europe/Switzerland, but the methods should be scalable across Europe and beyond. The work includes: (i) establishing reference databases for IAS metabarcoding analyses; (ii) developing end-to-end semiautomated analytical pipelines for eDNA metabarcoding; and (iii) proof-of-principle testing and application on existing aquatic eDNA datasets.

This is a 2-year postdoc position. The post explicitly encourages own contributions and ideas, with extensive intellectual freedom to shape the project. Relevant study areas include biology, environmental science, computer science, statistics, and related bioinformatics/data-analysis skills.

Deadline: August 14th.

Funding details

2-year postdoctoral position. No stipend amount or tuition details are mentioned.

What's required

Applicants should have strong interest and experience in analytical pipelines, data analysis, and environmental DNA/metabarcoding approaches. The post emphasizes independent contributions, own ideas, and the ability to develop end-to-end semiautomated workflows for aquatic eDNA datasets. A background relevant to biodiversity, invasive species, or aquatic ecology would be advantageous.

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Professors

Full Professor of Aquatic Ecology

University Name
Country flag

Switzerland

Research Interests

Ecology

Conservation Biology

Freshwater Ecology

Ecosystem Dynamics

Dna Metabarcoding