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Jon Agirre

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Senior Lecturer

University of York

United Kingdom

Research Interests

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Methods for building meaningful atomic models of carbohydrates

Open Date: 2017-10-01

Close Date: 2022-09-01

Articles (13)

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2025

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2024

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2024

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2024

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2024

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2024

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2024

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2023

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2023

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2023

Collaborators (18)

Rafael Borges

Research scientist

University of Campinas

BRAZIL

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Robbie Joosten

Netherlands Cancer Institute-Antoni van Leeuwenhoek Hospital

NETHERLANDS

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Paul Bond

University of York

UNITED KINGDOM

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Rajesh Ramachandran

Associate Professor

Case Western Reserve University School of Medicine

UNITED STATES

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Xin Qi

Professor

Case Western Reserve University

UNITED STATES

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Kathryn Douglas Cowtan

University of York

UNITED KINGDOM

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Elisa Fadda

Associate Professor

University of Southampton

UNITED KINGDOM

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Sylvie RICARD-BLUM

Professor

Université Claude Bernard Lyon 1

FRANCE

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Andrea Thorn

Head of Department

Helmholtz-Zentrum Berlin für Materialien und Energie

GERMANY

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Nathan Edwards

Professor

Georgetown University

UNITED STATES

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Cecilia Arighi

Research Associate Professor

University of Delaware

UNITED STATES

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Kiyoko F. Aoki-Kinoshita

Soka University

JAPAN

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Jordan Dialpuri

University of York

UNITED KINGDOM

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Callum Ives

Assistant Lecturer in Chemistry

Atlantic Technological University

IRELAND

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Anastassis Perrakis

Principal Investigator

Antoni van Leeuwenhoek Nederlands Kanker Instituut

NETHERLANDS

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Yukie Akune-Taylor

Project lecturer

Soka University

JAPAN

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Yan Liu

Senior Lecturer in Glycosciences

Imperial College London

UNITED KINGDOM

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Hiren Joshi

Københavns Universitet

DENMARK

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Jon Agirre

Research Interests

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Recent Grants

Articles (13)

Methods for detecting, building, and improving tryptophan mannosylation in glycoprotein structures

Functional implications of glycans and their curation: insights from the workshop held at the 16th Annual International Biocuration Conference in Padua, Italy

NucleoFind: a deep-learning network for interpreting nucleic acid electron density

Online carbohydrate 3D structure validation with the Privateer web app

Post-translational modifications in the Protein Data Bank

Monitoring carbohydrate 3D structure quality with the Privateer database

Allosteric control of dynamin-related protein 1 through a disordered C-terminal Short Linear Motif

Welcoming Alejandro Buschiazzo, Dorothee Liebschner and Stephen Muench as Co-editors of Acta Crystallographica F – Structural Biology Communications

The importance of international collaborations in science and structural biology

Beyond publishing: introducing Interviews with authors

Analysis and validation of overall N-glycan conformation in Privateer

The CCP4 suite: integrative software for macromolecular crystallography

Using structural genomics depositions in undergraduate teaching of protein crystallography: everybody wins

Collaborators (18)

Rafael Borges

Robbie Joosten

Paul Bond

Rajesh Ramachandran

Xin Qi

Kathryn Douglas Cowtan

Elisa Fadda

Sylvie RICARD-BLUM

Andrea Thorn

Nathan Edwards

Cecilia Arighi

Kiyoko F. Aoki-Kinoshita

Jordan Dialpuri

Callum Ives

Anastassis Perrakis

Yukie Akune-Taylor

Yan Liu

Hiren Joshi

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