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Joshua Lyte

Associate Professor

Auburn University

United States

Research Interests

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Professors in United States Professors in Microbiology Microbiology professors in United States

Articles (20)

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2026

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2024

Collaborators (14)

Xiang Li

Assistant Professor

The University of Tennessee Knoxville

UNITED STATES

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Danielle Graham

Assistant Professor

University of Arkansas

UNITED STATES

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Brett Hale

Head

Agroscope

UNITED STATES

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Gerard Clarke

University College Cork

IRELAND

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Valentina Caputi

Assistant Research Professor in Poultry Intestinal Health

Auburn University

UNITED STATES

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Mark Lyte

Professor

Iowa State University

UNITED STATES

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Sami Dridi

Professor

University of Arkansas

UNITED STATES

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Gregory S Fraley

Purdue University

UNITED STATES

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Timothy Johnson

University of Minnesota

UNITED STATES

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Guolong Zhang

Regents Professor

Oklahoma State University Stillwater

UNITED STATES

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Maria R. Aburto

University College Cork

IRELAND

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Christopher Ashwell

Associate Dean

West Virginia University

UNITED STATES

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Sarah-Jane Leigh

Research Associate

University of New South Wales

AUSTRALIA

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Li Zhang

Assistant Research Professor

Mississippi State University

UNITED STATES

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Joshua Lyte

Research Interests

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Articles (20)

Full thickness three-dimensional mapping of neuronal populations within the avian enteric nervous system

Characterization of catecholaminergic and serotonergic pathways in the trachea of the chicken and turkey

Best practices framework for using 16S rRNA gene sequencing in poultry microbiota research

Orange corn diet modulates Pekin duck cecal neurochemistry under normal and heat stress conditions

Agronomic and Environmental Impacts of Treating Poultry Litter with Litter Amendments

Importance of methods selected for microbiome studies: State of the science and challenges

Regional expression of neurochemical metabolic pathways in the intestinal tract of the turkey (Meleagris gallopavo domesticus)

Serum biochemical profiles are distinct between White Leghorn chicken lines selected for divergent antibody response to sheep red blood cells

Do we need a standardized 16S rRNA gene amplicon sequencing analysis protocol for poultry microbiota research?

Multigenerational selection for high or low antibody response to sheep red blood cells modulates the chicken cecal microbiome and its relationship to the immune and serotonergic systems

Heat stress in chickens induces temporal changes in the cecal microbiome concomitant with host enteric serotonin responses

Co-evolution of the humoral immune and serotonergic systems in chickens selected for high or low blood antibody titer response to sheep red blood cells

Effects of semi-open water and non-water enrichment on welfare, production, behavior, and microbial exposure of grow-out Pekin ducks

Acute stress-induced alterations in short-chain fatty acids

Neurochemical metabolic pathways display regional and age-specific expression patterns in the chicken intestinal tract

Stress neurophysiology in poultry: A functional framework for the application of microbiome science in poultry production

Fitness factors and siderophores influence the survival of E. coli in reused broiler litter

The microbiota drives diurnal rhythms in tryptophan metabolism in the stressed gut.

Cold stress initiates catecholaminergic and serotonergic responses in the chicken gut that are associated with functional shifts in the microbiome

Leaching of antibiotic resistance genes and microbial assemblages following poultry litter applications in karst and non-karst landscapes.

Collaborators (14)

Xiang Li

Danielle Graham

Brett Hale

Gerard Clarke

Valentina Caputi

Mark Lyte

Sami Dridi

Gregory S Fraley

Timothy Johnson

Guolong Zhang

Maria R. Aburto

Christopher Ashwell

Sarah-Jane Leigh

Li Zhang

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