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Alan Rubin

Group Leader

University of Melbourne

Australia

Research Interests

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Professors in Australia Professors in Biostatistics Biostatistics professors in Australia

Articles (18)

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2026

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2023

Collaborators (26)

Tri Nguyen

Research Scientist

Stanford University

UNITED STATES

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S. Stephen Yi

Associate Professor and Research Member

Baylor College of Medicine

UNITED STATES

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richard james

Associate Professor

University of Washington

UNITED STATES

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John A. Karas

AUSTRALIA

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Vivekanandan Ramalingam

Stanford University

UNITED STATES

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Lea Starita

Research Assistant Professor

University of Washington

UNITED STATES

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Michael Bassik

Associate Professor

Stanford University

UNITED STATES

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Harinder Singh

Professor and Director

University of Pittsburgh

UNITED STATES

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Yihan Wang

University of Texas Southwestern Medical School

UNITED STATES

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Andrew Glazer

Assistant Professor

Vanderbilt University Medical Center

UNITED STATES

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Angelo Taglialatela

Columbia University Irving Medical Center

UNITED STATES

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Sarah Hunt

EMBL-European Bioinformatics Institute

UNITED KINGDOM

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Joseph Marsh

University of Edinburgh

UNITED KINGDOM

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David Adams

Senior Group Leader (and Interim Programme Head)

Wellcome Sanger Institute

UNITED KINGDOM

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Matthew Hurles

Wellcome Sanger Institute

UNITED KINGDOM

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Judhajeet Ray

Head of Functional Genomics

Broad Institute

UNITED STATES

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Jesse Engreitz

Stanford University

UNITED STATES

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Jian Ma

Ray and Stephanie Lane Professor of Computational Biology

Carnegie Mellon University

UNITED STATES

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Frederick Roth

Professor

University of Toronto

CANADA

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Beatrice Borsari

Serra-Hunter Assistant Professor

Universitat Autònoma de Barcelona

SPAIN

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Laura Luebbert

Broad Institute

UNITED STATES

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Anna Gloyn

University of Oxford

UNITED KINGDOM

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Yun Li

Professor

University of North Carolina

UNITED STATES

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Douglas Fowler

Professor

University of Washington

UNITED STATES

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H. Leighton Grimes

Professor

Cincinnati Children's Hospital Medical Center

UNITED STATES

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Jasmine Sakr

University of California, Irvine

UNITED STATES

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Alan Rubin

Research Interests

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Articles (18)

VEFill: accurate and generalizable deep mutational scanning score imputation across protein domains

Variant scoring tools for deep mutational scanning

Mapping MAVE data for use in human genomics applications.

Multiplex and multimodal mapping of variant effects in secreted proteins via MultiSTEP

Consultation informs strategies for improving the use of functional evidence in variant classification.

Insights on improving accessibility and usability of functional data to unlock their potential for variant interpretation.

Guidelines for releasing a variant effect predictor.

MaveDB 2024: a curated community database with over seven million variant effects from multiplexed functional assays

Deciphering the impact of genomic variation on function.

Minimum information and guidelines for reporting a multiplexed assay of variant effect.

Workshop report: the clinical application of data from multiplex assays of variant effect (MAVEs), 12 July 2023

Proinsulin C-peptide is a major source of HLA-DQ8 restricted hybrid insulin peptides recognized by human islet-infiltrating CD4+ T cells

Using multiplexed functional data to reduce variant classification inequities in underrepresented populations.

Genomics 2 Proteins portal: a resource and discovery tool for linking genetic screening outputs to protein sequences and structures

Deep mutational scanning of CYP2C19 in human cells reveals a substrate specificity-abundance tradeoff.

A new way of looking at transcription factor assays

An Atlas of Variant Effects to understand the genome at nucleotide resolution

sccomp: Robust differential composition and variability analysis for single-cell data

Collaborators (26)

Tri Nguyen

S. Stephen Yi

richard james

John A. Karas

Vivekanandan Ramalingam

Lea Starita

Michael Bassik

Harinder Singh

Yihan Wang

Andrew Glazer

Angelo Taglialatela

Sarah Hunt

Joseph Marsh

David Adams

Matthew Hurles

Judhajeet Ray

Jesse Engreitz

Jian Ma

Frederick Roth

Beatrice Borsari

Laura Luebbert

Anna Gloyn

Yun Li

Douglas Fowler

H. Leighton Grimes

Jasmine Sakr

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