PhD Opportunities in Computational Biology in France

PhD opportunity in Hybrid Modeling & Digital Twins within the Engineering Digital Twins (EDT) research program. The project, titled Compositional Hybrid Digital Twins Models , focuses on combining mechanistic models and machine learning to build flexible and reusable digital twin architectures. The case study is microbial fermentation ecosystems , with an emphasis on understanding, simulating, and predicting the dynamics of complex biological systems. Research themes include hybrid modeling , mo...

PhD opening in Computational Systems Biology / Bioinformatics at the CBI - Centre for Integrative Biology of Toulouse in France, within the MSCA PANDORA doctoral network . The project is titled “Development of a multi-scale predictive digital twin of the retina affected by age-related macular degeneration (AMD)” . The doctoral researcher will work on systems-level modeling of retinal mechanisms linked to AMD and the complement system, building large-scale molecular interaction maps, converting t...

Institut Imagine in Paris is advertising a PhD opportunity in bioinformatics and epigenetics within the international Pasteur Paris-University (PPU) doctoral programme. The project, titled EpiOdyssey - An epigenomic ID for better diagnosis , focuses on improving the diagnosis of rare genetic disorders by investigating epigenetic signatures . The research combines DNA methylation and histone-mark profiling with bioinformatics approaches. Planned work includes multi-omics data analysis , developme...

We’re hiring a postdoc or PhD-qualified research engineer in single-cell and spatial bioinformatics in Bordeaux, France . Join the Computational Biology and Bioinformatics team at IBGC (CNRS) to study how cancer stem cells and immunosuppressive myeloid cells communicate in liver cancer / hepatocellular carcinoma . This INCa PLBIO-funded project combines single-cell RNA-seq , single-cell epigenomics , and spatial transcriptomics from human tumours, plus RNA-seq and proteomics from co-culture expe...

The Institut Pasteur in France is offering a PhD student position in the Machine Learning for Integrative Genomics team, led by Laura Cantini. This research group operates at the intersection of machine learning and biology, focusing on the development of innovative computational methods for single-cell data analysis. The successful candidate will work on projects involving the integration of multi-omics data, with a particular emphasis on inferring trajectories from spatial transcriptomics data...